Allium

Allium is a genus of monocotyledonous flowering plants that includes hundreds of species, including the cultivated onion, garlic, scallion, shallot, leek, and chives. The generic name Allium is the Latin word for garlic, and the type species for the genus is Allium sativum which means "cultivated garlic".

Linnaeus first described the genus Allium in 1753. Some sources refer to Greek αλεω (aleo, to avoid) by reason of the smell of garlic. Various Allium have been cultivated from the earliest times, and about a dozen species are economically important as crops, or garden vegetables, and an increasing number of species are important as ornamental plants.

The decision to include a species in the genus Allium is taxonomically difficult, and species boundaries are unclear. Estimates of the number of species are as low as 260, and as high as 979.

Allium species occur in temperate climates of the Northern Hemisphere, except for a few species occurring in Chile (such as A. juncifolium), Brazil (A. sellovianum), and tropical Africa (A. spathaceum). They vary in height between 5 cm and 150 cm. The flowers form an umbel at the top of a leafless stalk. The bulbs vary in size between species, from small (around 2–3 mm in diameter) to rather large (8–10 cm). Some species (such as Welsh onion A. fistulosum) develop thickened leaf-bases rather than forming bulbs as such.

Plants of the genus Allium produce chemical compounds, mostly derived from cysteine sulfoxides, that give them a characteristic onion, or garlic, taste and odor. Many are used as food plants, though not all members of the genus are equally flavorful. In most cases, both bulb and leaves are edible. The cooking and consumption of parts of the plants is due to the large variety of textures, and flavours, which may be strong or weak, that they can impart to the dish they are used in. The characteristic Allium flavor depends on the sulfate content of the soil the plant grows in. In the rare occurrence of sulfur-free growth conditions, all Allium species completely lose their usual pungency.

In the APG III classification system, Allium is placed in the family Amaryllidaceae, subfamily Allioideae (formerly the family Alliaceae). In some of the older classification systems, Allium was placed in Liliaceae. Molecular phylogenetic studies have shown this circumscription of Liliaceae is not monophyletic.

Allium is one of about fifty-seven genera of flowering plants with more than 500 species. It is by far the largest genus in the Amaryllidaceae, and also in the Alliaceae in classification systems in which that family is recognized as separate.

Description
The genus Allium (alliums) is characterised by herbaceous geophyte perennials with true bulbs, some of which are borne on rhizomes and an onion or garlic odor and flavor.

The bulbs are solitary or clustered and tunicate and the plants are perennialized by the bulbs reforming annually from the base of the old bulbs, or are produced on the ends of rhizomes or, in a few species, at the ends of stolons. A small number of species have tuberous roots. The bulbs' outer coats are commonly brown or grey, with a smooth texture, and are fibrous, or with cellular reticulation. The inner coats of the bulbs are membranous.

Many alliums have basal leaves that commonly wither away from the tips downward before or while the plants flower, but some species have persistent foliage. Plants produce from one to 12 leaves, most species having linear, channeled or flat leaf blades. The leaf blades are straight or variously coiled, but some species have broad leaves, including A. victorialis and A. tricoccum. The leaves are sessile, and very rarely narrowed into a petiole.

The flowers, which are produced on scapes are erect or in some species pendent, having six petal-like tepals produced in two whorls. The flowers have one style and six epipetalous stamens; the anthers and pollen can vary in color depending on the species. The ovaries are superior, and three-lobed with three locules.

The fruits are capsules that open longitudinally along the capsule wall between the partitions of the locule. The seeds are black, and have a rounded shape.

The terete or flattened flowering scapes are normally persistent. The inflorescences are umbels, in which the outside flowers bloom first and flowering progresses to the inside. Some species produce bulbils within the umbels, and in some species, such as Allium paradoxum, the bulbils replace some or all the flowers. The umbels are subtended by noticeable spathe bracts, which are commonly fused and normally have around three veins.

Some bulbous alliums increase by forming little bulbs or "offsets" around the old one, as well as by seed. Several species can form many bulbils in the flowerhead; in the so-called "tree onion" or Egyptian onion (A. × proliferum) the bulbils are few, but large enough to be pickled.

Many of the species of Allium have been used as food items throughout their ranges. There are several poisonous species that are somewhat similar in appearance (e.g. in North America, death camas, Toxicoscordion venenosum), but none of these has the distinctive scent of onions or garlic.

Taxonomy
With over 850 species Allium is the sole genus in the Allieae, one of four tribes of subfamily Allioideae (Amaryllidaceae). New species continue to be described and Allium is one of the largest monocotyledonous genera, but the precise taxonomy of Allium is poorly understood, with incorrect descriptions being widespread. The difficulties arise from the fact that the genus displays considerable polymorphism and has adapted to a wide variety of habitats. Furthermore, traditional classications had been based on homoplasious characteristics (the independent evolution of similar features in species of different lineages). However, the genus has been shown to be monophyletic, containing three major clades, although some proposed subgenera are not. Some progress is being made using molecular phylogenetic methods, and the internal transcribed spacer (ITS) region, including the 5.8S rDNA and the two spacers ITS1 and ITS2, is one of the more commonly used markers in the study of the differentiation of the Allium species.

Allium includes a number of taxonomic groupings previously considered separate genera (Caloscordum Herb., Milula Prain and Nectaroscordum Lindl.) Allium spicatum had been treated by many authors as Milula spicata, the only species in the monospecific genus Milula. In 2000, it was shown to be embedded in Allium.
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